Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase recq | DDQ68_RS07505 | Not Available | Negative | 1714444 - 1716684 | 82388.1 |
| is5/is1182 family transposase | DDQ68_RS24680 | Not Available | Negative | 1716859 - 1716942 | 3372.95 |
| transposase | DDQ68_RS24685 | Not Available | Positive | 1717145 - 1717795 | 22642.0 |
| hypothetical protein | DDQ68_RS07515 | Not Available | Positive | 1717732 - 1718202 | 18017.9 |
| hypothetical protein | DDQ68_RS24690 | Not Available | Positive | 1718284 - 1718550 | 9394.83 |
| t9ss type a sorting domain-containing protein | DDQ68_RS07525 | Not Available | Negative | 1718532 - 1720655 | 74744.3 |
| abc transporter atp-binding protein | DDQ68_RS07530 | Not Available | Positive | 1721142 - 1722920 | 66072.0 |
| pepsy-like domain-containing protein | DDQ68_RS07535 | Not Available | Positive | 1723539 - 1723970 | 15121.1 |
| tonb-dependent receptor domain-containing protein | DDQ68_RS07540 | Not Available | Positive | 1724076 - 1726490 | 86603.9 |
| hypothetical protein | DDQ68_RS24240 | Not Available | Negative | 1726602 - 1726724 | 4519.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
