Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DDQ68_RS07460 | Not Available | Negative | 1702974 - 1704590 | 58920.5 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS07465 | Not Available | Negative | 1704705 - 1707776 | 109930.0 |
| zinc-dependent peptidase | DDQ68_RS07470 | Not Available | Positive | 1708566 - 1709498 | 34013.5 |
| gaf domain-containing protein | DDQ68_RS07475 | Not Available | Negative | 1709515 - 1710237 | 25882.9 |
| pirin family protein | DDQ68_RS07480 | Not Available | Negative | 1710252 - 1710974 | 27126.1 |
| porin family protein | DDQ68_RS07485 | Not Available | Positive | 1711174 - 1711842 | 23841.1 |
| duf4142 domain-containing protein | DDQ68_RS07490 | Not Available | Positive | 1711934 - 1712533 | 22026.4 |
| lexa family transcriptional regulator | DDQ68_RS07495 | Not Available | Negative | 1712629 - 1713450 | 30055.1 |
| duf5615 family pin-like protein | DDQ68_RS24675 | Not Available | Negative | 1713745 - 1714068 | 12355.2 |
| duf433 domain-containing protein | DDQ68_RS07500 | Not Available | Negative | 1714078 - 1714359 | 10252.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
