Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | DDQ68_RS07360 | Not Available | Negative | 1684356 - 1685153 | 28046.3 |
| sugar phosphate isomerase/epimerase family protein | DDQ68_RS07365 | Not Available | Negative | 1685205 - 1686080 | 32749.3 |
| hydroxypyruvate isomerase family protein | DDQ68_RS07370 | Not Available | Negative | 1686122 - 1686940 | 29960.1 |
| c-type cytochrome | DDQ68_RS07375 | Not Available | Negative | 1687092 - 1687517 | 14027.9 |
| sugar phosphate isomerase/epimerase family protein | DDQ68_RS07380 | Not Available | Negative | 1687531 - 1688583 | 39394.5 |
| gfo/idh/moca family protein | DDQ68_RS07385 | Not Available | Negative | 1688591 - 1689742 | 41072.0 |
| nucleoside permease | DDQ68_RS07390 | Not Available | Negative | 1689851 - 1691101 | 45170.1 |
| gluconate 2-dehydrogenase subunit 3 family protein | DDQ68_RS07395 | Not Available | Negative | 1691159 - 1691773 | 21875.4 |
| gmc oxidoreductase | DDQ68_RS07400 | Not Available | Negative | 1691799 - 1693475 | 62946.4 |
| mbl fold metallo-hydrolase | DDQ68_RS07405 | Not Available | Positive | 1694027 - 1694599 | 20523.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
