Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS24155 | Not Available | Positive | 146677 - 146799 | 4627.49 |
| fibronectin type iii-like domain-contianing protein | DDQ68_RS23325 | Not Available | Positive | 147057 - 147362 | 10541.9 |
| xylulokinase | DDQ68_RS00665 | Not Available | Positive | 147359 - 148867 | 53848.1 |
| xylose isomerase | DDQ68_RS00670 | Not Available | Positive | 148957 - 150273 | 48905.2 |
| transketolase | DDQ68_RS00675 | Not Available | Positive | 150493 - 152562 | 75177.1 |
| hypothetical protein | DDQ68_RS22310 | Not Available | Positive | 152998 - 153162 | 5505.76 |
| hypothetical protein | DDQ68_RS00680 | Not Available | Positive | 153629 - 154480 | 29592.6 |
| hypothetical protein | DDQ68_RS00685 | Not Available | Negative | 154559 - 154792 | 8764.62 |
| hypothetical protein | DDQ68_RS00690 | Not Available | Positive | 155078 - 155260 | 6395.49 |
| mgh1-like glycoside hydrolase domain-containing protein | DDQ68_RS00695 | Not Available | Positive | 155370 - 156386 | 38047.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
