Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m1 family metallopeptidase | DDQ68_RS07055 | Not Available | Positive | 1608528 - 1610369 | 64964.6 |
| cyanophycinase | DDQ68_RS07060 | Not Available | Positive | 1610519 - 1611388 | 31373.3 |
| polyketide synthase | DDQ68_RS07065 | Not Available | Positive | 1611969 - 1618688 | 236376.0 |
| hypothetical protein | DDQ68_RS23430 | Not Available | Negative | 1618718 - 1618939 | 8124.96 |
| non-ribosomal peptide synthetase | DDQ68_RS07075 | Not Available | Positive | 1618959 - 1623011 | 146927.0 |
| isoaspartyl peptidase/l-asparaginase family protein | DDQ68_RS07080 | Not Available | Negative | 1623093 - 1624022 | 32007.0 |
| duf3127 domain-containing protein | DDQ68_RS07085 | Not Available | Positive | 1624170 - 1624604 | 16042.8 |
| helix-turn-helix domain-containing protein | DDQ68_RS07090 | Not Available | Positive | 1624736 - 1625368 | 24031.0 |
| helix-turn-helix domain-containing protein | DDQ68_RS07095 | Not Available | Positive | 1625414 - 1625803 | 13803.5 |
| is630 family transposase | DDQ68_RS07100 | Not Available | Positive | 1625722 - 1626363 | 23109.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
