Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DDQ68_RS07005 | Not Available | Positive | 1597751 - 1597939 | 6893.64 |
| duf262 domain-containing protein | DDQ68_RS07010 | Not Available | Negative | 1598342 - 1600153 | 70700.1 |
| is630 family transposase | DDQ68_RS07015 | Not Available | Negative | 1600198 - 1600935 | 27700.2 |
| helix-turn-helix domain-containing protein | DDQ68_RS07020 | Not Available | Negative | 1600893 - 1601363 | 16590.9 |
| nudix domain-containing protein | DDQ68_RS07025 | Not Available | Negative | 1601698 - 1602213 | 19344.8 |
| dead/deah box helicase | DDQ68_RS07030 | Not Available | Positive | 1602511 - 1604010 | 53827.1 |
| hypothetical protein | DDQ68_RS07035 | Not Available | Positive | 1604123 - 1604602 | 17785.4 |
| hypothetical protein | DDQ68_RS22660 | Not Available | Negative | 1604745 - 1604921 | 6319.46 |
| helix-turn-helix domain-containing protein | DDQ68_RS07045 | Not Available | Negative | 1605651 - 1606244 | 20164.7 |
| l,d-transpeptidase family protein | DDQ68_RS07050 | Not Available | Negative | 1606519 - 1608297 | 66140.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
