Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | DDQ68_RS24665 | Not Available | Negative | 1582674 - 1582928 | 9864.37 |
| hypothetical protein | DDQ68_RS06915 | Not Available | Negative | 1583085 - 1583354 | 10165.3 |
| hypothetical protein | DDQ68_RS22655 | Not Available | Negative | 1583557 - 1583700 | 5065.08 |
| transposase | DDQ68_RS24670 | Not Available | Negative | 1583719 - 1583877 | 5975.08 |
| helix-turn-helix domain-containing protein | DDQ68_RS06925 | Not Available | Positive | 1583908 - 1584351 | 15633.2 |
| is630 family transposase | DDQ68_RS06930 | Not Available | Positive | 1584357 - 1585055 | 26707.8 |
| transposase family protein | DDQ68_RS06935 | Not Available | Negative | 1585233 - 1585673 | 16413.1 |
| transposase family protein | DDQ68_RS06940 | Not Available | Negative | 1585679 - 1586182 | 18834.4 |
| hypothetical protein | DDQ68_RS06945 | Not Available | Positive | 1586445 - 1587245 | 30183.8 |
| hypothetical protein | DDQ68_RS06950 | Not Available | Negative | 1587275 - 1587688 | 14643.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
