Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional ynce family protein/alkaline phosphatase family protein | DDQ68_RS00610 | Not Available | Positive | 125862 - 128306 | 88372.6 |
| glycoside hydrolase family 13 protein | DDQ68_RS00615 | Not Available | Negative | 128497 - 130275 | 66414.2 |
| glycoside hydrolase family 65 protein | DDQ68_RS00620 | Not Available | Negative | 130469 - 132538 | 76081.1 |
| glycoside hydrolase family 13 protein | DDQ68_RS00625 | Not Available | Negative | 132689 - 134437 | 66782.1 |
| ragb/susd family nutrient uptake outer membrane protein | DDQ68_RS00630 | Not Available | Negative | 134531 - 136093 | 56819.4 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS00635 | Not Available | Negative | 136116 - 139184 | 109723.0 |
| glycoside hydrolase family 32 protein | DDQ68_RS00640 | Not Available | Negative | 139566 - 141128 | 57028.5 |
| carbohydrate kinase family protein | DDQ68_RS00645 | Not Available | Negative | 141152 - 142036 | 31153.2 |
| sugar porter family mfs transporter | DDQ68_RS00650 | Not Available | Negative | 142078 - 143391 | 47564.7 |
| substrate-binding domain-containing protein | DDQ68_RS00655 | Not Available | Negative | 143593 - 146355 | 100765.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
