Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dde-type integrase/transposase/recombinase | DDQ68_RS06620 | Not Available | Negative | 1523262 - 1523549 | 10357.2 |
| is3 family transposase | DDQ68_RS24660 | Not Available | Negative | 1523468 - 1523755 | 10649.1 |
| tonb-dependent receptor | DDQ68_RS06630 | Not Available | Positive | 1524108 - 1526900 | 102327.0 |
| hypothetical protein | DDQ68_RS06635 | Not Available | Positive | 1526931 - 1527920 | 36131.0 |
| hypothetical protein | DDQ68_RS06640 | Not Available | Positive | 1527963 - 1529387 | 49996.1 |
| metallophosphoesterase family protein | DDQ68_RS06645 | Not Available | Positive | 1529532 - 1530596 | 37722.9 |
| transposase | DDQ68_RS06650 | Not Available | Negative | 1530935 - 1531186 | 8857.85 |
| tonb-dependent receptor plug domain-containing protein | DDQ68_RS06655 | Not Available | Negative | 1531255 - 1531626 | 12684.8 |
| carboxypeptidase-like regulatory domain-containing protein | DDQ68_RS06660 | Not Available | Negative | 1531569 - 1532039 | 15463.4 |
| hypothetical protein | DDQ68_RS06665 | Not Available | Negative | 1532289 - 1532846 | 19985.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
