Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | DDQ68_RS06520 | Not Available | Positive | 1503158 - 1504477 | 45932.3 |
| is5/is1182 family transposase | DDQ68_RS23745 | Not Available | Negative | 1504674 - 1505633 | 34686.6 |
| pa domain-containing protein | DDQ68_RS06535 | Not Available | Negative | 1505668 - 1506006 | 12150.2 |
| is481 family transposase | DDQ68_RS06540 | Not Available | Negative | 1506028 - 1506993 | 36400.8 |
| pd-(d/e)xk nuclease-like domain-containing protein | DDQ68_RS06545 | Not Available | Negative | 1506906 - 1507325 | 15755.1 |
| radical sam protein | DDQ68_RS06550 | Not Available | Negative | 1507519 - 1508466 | 35484.2 |
| abc transporter atp-binding protein | DDQ68_RS06555 | Not Available | Negative | 1508547 - 1509341 | 29400.7 |
| is630 family transposase | DDQ68_RS23410 | Not Available | Negative | 1509360 - 1509971 | 23982.4 |
| helix-turn-helix domain-containing protein | DDQ68_RS23415 | Not Available | Negative | 1510007 - 1510450 | 16788.3 |
| hypothetical protein | DDQ68_RS06565 | Not Available | Negative | 1510506 - 1511174 | 24958.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
