Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 18 protein | DDQ68_RS00560 | Not Available | Negative | 114222 - 115160 | 32699.2 |
| sugar mfs transporter | DDQ68_RS00565 | Not Available | Negative | 115173 - 116468 | 45045.5 |
| glucosamine-6-phosphate deaminase | DDQ68_RS00570 | Not Available | Negative | 116576 - 118492 | 71966.9 |
| laci family dna-binding transcriptional regulator | DDQ68_RS00575 | Not Available | Positive | 119026 - 120126 | 41412.4 |
| helix-turn-helix domain-containing protein | DDQ68_RS00580 | Not Available | Positive | 120483 - 120779 | 10588.9 |
| transposase | DDQ68_RS00585 | Not Available | Positive | 120980 - 121297 | 12099.3 |
| apc family permease | DDQ68_RS00590 | Not Available | Negative | 121519 - 122784 | 45116.3 |
| Trna-ala | Not Available | Not Available | Positive | 123618 - 123694 | Not Available |
| gfo/idh/moca family protein | DDQ68_RS00600 | Not Available | Negative | 123767 - 125206 | 52845.7 |
| hypothetical protein | DDQ68_RS00605 | Not Available | Positive | 125548 - 125715 | 6304.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
