Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | DDQ68_RS05980 | Not Available | Negative | 1381009 - 1383174 | 78686.8 |
| 30s ribosomal protein s15 | DDQ68_RS05985 | Not Available | Negative | 1383350 - 1383625 | 10774.2 |
| lptf/lptg family permease | DDQ68_RS05990 | Not Available | Negative | 1383748 - 1385196 | 54065.9 |
| is481 family transposase | DDQ68_RS05995 | Not Available | Negative | 1385267 - 1386232 | 36446.8 |
| start-like domain-containing protein | DDQ68_RS06000 | Not Available | Negative | 1386290 - 1386694 | 15030.5 |
| Trna-met | Not Available | Not Available | Positive | 1386827 - 1386900 | Not Available |
| 50s ribosomal protein l20 | DDQ68_RS06010 | Not Available | Negative | 1387073 - 1387417 | 13194.4 |
| 50s ribosomal protein l35 | DDQ68_RS06015 | Not Available | Negative | 1387603 - 1387797 | 7222.1 |
| is5/is1182 family transposase | DDQ68_RS06020 | Not Available | Negative | 1388022 - 1388564 | 21014.7 |
| threonine--trna ligase | DDQ68_RS06025 | Not Available | Negative | 1388778 - 1390712 | 72421.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
