Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS05930 | Not Available | Negative | 1371125 - 1371529 | 14789.7 |
| hypothetical protein | DDQ68_RS05935 | Not Available | Negative | 1371786 - 1372214 | 15060.8 |
| abc-f family atp-binding cassette domain-containing protein | DDQ68_RS05940 | Not Available | Positive | 1372472 - 1374094 | 60930.1 |
| hypothetical protein | DDQ68_RS05945 | Not Available | Positive | 1374191 - 1375018 | 29546.0 |
| lmo0937 family membrane protein | DDQ68_RS05950 | Not Available | Negative | 1375099 - 1375269 | 5980.88 |
| 3-hydroxybutyryl-coa dehydrogenase | DDQ68_RS05955 | Not Available | Positive | 1375449 - 1376336 | 31347.3 |
| bacillithiol biosynthesis deacetylase bshb1 | DDQ68_RS05960 | Not Available | Negative | 1376910 - 1377638 | 26546.6 |
| m23 family metallopeptidase | DDQ68_RS24225 | Not Available | Negative | 1377774 - 1378886 | 41129.9 |
| thioredoxin-disulfide reductase | DDQ68_RS05970 | Not Available | Negative | 1378948 - 1379883 | 33412.1 |
| rna polymerase sigma factor rpod/siga | DDQ68_RS05975 | Not Available | Negative | 1380029 - 1380892 | 32840.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
