Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin monoamine oxidase family protein | DDQ68_RS05880 | Not Available | Negative | 1357992 - 1359122 | 38888.6 |
| monofunctional biosynthetic peptidoglycan transglycosylase | DDQ68_RS05885 | Not Available | Negative | 1359839 - 1360609 | 28560.6 |
| m1 family metallopeptidase | DDQ68_RS05890 | Not Available | Positive | 1360832 - 1363396 | 95193.3 |
| lysr substrate-binding domain-containing protein | DDQ68_RS05895 | Not Available | Negative | 1363418 - 1364311 | 32735.1 |
| 4-hydroxyphenylpyruvate dioxygenase | DDQ68_RS05900 | Not Available | Positive | 1364610 - 1365740 | 42349.9 |
| homogentisate 1,2-dioxygenase | DDQ68_RS05905 | Not Available | Positive | 1365914 - 1367080 | 43964.5 |
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | DDQ68_RS05910 | Not Available | Positive | 1367378 - 1368607 | 44222.9 |
| lon peptidase substrate-binding domain-containing protein | DDQ68_RS05915 | Not Available | Positive | 1368706 - 1369338 | 24358.5 |
| m48 family metallopeptidase | DDQ68_RS05920 | Not Available | Negative | 1369550 - 1370365 | 28717.2 |
| hypothetical protein | DDQ68_RS22635 | Not Available | Positive | 1370526 - 1370963 | 15778.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
