Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS23630 | Not Available | Negative | 97882 - 98043 | 6050.43 |
| is5/is1182 family transposase | DDQ68_RS24515 | Not Available | Negative | 98083 - 98193 | 4516.48 |
| Trna-ala | Not Available | Not Available | Positive | 98351 - 98424 | Not Available |
| beta-n-acetylhexosaminidase | DDQ68_RS00530 | Not Available | Negative | 98567 - 100426 | 68343.6 |
| gh92 family glycosyl hydrolase | DDQ68_RS00535 | Not Available | Negative | 100705 - 103020 | 84823.9 |
| glycoside hydrolase family 2 protein | DDQ68_RS00540 | Not Available | Negative | 103200 - 105821 | 97814.0 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | DDQ68_RS00545 | Not Available | Negative | 106065 - 108461 | 84827.6 |
| hypothetical protein | DDQ68_RS22305 | Not Available | Negative | 108472 - 108657 | 6016.56 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DDQ68_RS00550 | Not Available | Negative | 108891 - 110480 | 58259.3 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS00555 | Not Available | Negative | 110514 - 113588 | 109994.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
