Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine kinase | DDQ68_RS05545 | Not Available | Positive | 1282800 - 1283651 | 31516.1 |
| alpha-amylase family glycosyl hydrolase | DDQ68_RS05550 | Not Available | Negative | 1283747 - 1286620 | 103605.0 |
| smr/muts family protein | DDQ68_RS23730 | Not Available | Positive | 1286965 - 1288188 | 43231.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1288550 - 1288933 | Not Available |
| sigma-54-dependent transcriptional regulator | DDQ68_RS05570 | Not Available | Positive | 1289064 - 1290227 | 42499.5 |
| glcg/hbps family heme-binding protein | DDQ68_RS05575 | Not Available | Positive | 1290472 - 1290879 | 13837.5 |
| formaldehyde dehydrogenase, glutathione-independent | DDQ68_RS05580 | Not Available | Positive | 1290928 - 1292160 | 43008.9 |
| carboxypeptidase-like regulatory domain-containing protein | DDQ68_RS05585 | Not Available | Positive | 1292413 - 1293297 | 31754.1 |
| hypothetical protein | DDQ68_RS05590 | Not Available | Positive | 1293456 - 1293776 | 12733.2 |
| methylmalonyl-coa mutase family protein | DDQ68_RS05595 | Not Available | Positive | 1294060 - 1297479 | 126723.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
