Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf294 nucleotidyltransferase-like domain-containing protein | DDQ68_RS05445 | Not Available | Negative | 1256076 - 1257992 | 73417.9 |
| 3'-5' exonuclease | DDQ68_RS05450 | Not Available | Negative | 1257985 - 1258722 | 26879.3 |
| bifunctional transaldolase/phosoglucose isomerase | DDQ68_RS05455 | Not Available | Positive | 1258891 - 1261713 | 101213.0 |
| leucyl aminopeptidase family protein | DDQ68_RS05460 | Not Available | Positive | 1261808 - 1263277 | 51730.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DDQ68_RS05465 | Not Available | Positive | 1263421 - 1264455 | 37208.4 |
| yced family protein | DDQ68_RS05470 | Not Available | Positive | 1264552 - 1265085 | 20342.7 |
| 50s ribosomal protein l32 | DDQ68_RS05475 | Not Available | Positive | 1265222 - 1265446 | 8219.79 |
| phosphate acyltransferase plsx | DDQ68_RS05480 | Not Available | Positive | 1265569 - 1266510 | 33049.1 |
| beta-ketoacyl-acp synthase iii | DDQ68_RS05485 | Not Available | Positive | 1266647 - 1267639 | 35967.9 |
| elongation factor p | DDQ68_RS05490 | Not Available | Positive | 1267741 - 1268304 | 21191.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
