Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | DDQ68_RS05350 | Not Available | Negative | 1234425 - 1235192 | 27672.7 |
| thioredoxin family protein | DDQ68_RS05355 | Not Available | Negative | 1235302 - 1235658 | 13481.2 |
| duf885 domain-containing protein | DDQ68_RS05360 | Not Available | Negative | 1235719 - 1237473 | 65906.6 |
| eco57i restriction-modification methylase domain-containing protein | DDQ68_RS05365 | Not Available | Positive | 1237586 - 1241191 | 135986.0 |
| hypothetical protein | DDQ68_RS22600 | Not Available | Positive | 1241196 - 1241627 | 16109.2 |
| nad(p)/fad-dependent oxidoreductase | DDQ68_RS05370 | Not Available | Positive | 1241897 - 1243210 | 48507.0 |
| transposase | DDQ68_RS05375 | Not Available | Positive | 1243406 - 1243870 | 17380.8 |
| dna/rna non-specific endonuclease | DDQ68_RS23715 | Not Available | Positive | 1244063 - 1245490 | 50197.6 |
| alpha/beta hydrolase | DDQ68_RS05385 | Not Available | Negative | 1245487 - 1246341 | 31049.5 |
| m28 family peptidase | DDQ68_RS05390 | Not Available | Negative | 1246447 - 1247490 | 36740.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
