Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit n | DDQ68_RS05300 | Not Available | Positive | 1224728 - 1226104 | 47733.7 |
| is5/is1182 family transposase | DDQ68_RS24630 | Not Available | Positive | 1226408 - 1226467 | 2113.4 |
| trypsin-like peptidase domain-containing protein | DDQ68_RS05310 | Not Available | Negative | 1226711 - 1228219 | 51869.3 |
| helix-turn-helix domain-containing protein | DDQ68_RS05315 | Not Available | Positive | 1228741 - 1229142 | 15304.5 |
| is5/is1182 family transposase | DDQ68_RS05320 | Not Available | Positive | 1229193 - 1229753 | 21418.3 |
| peroxiredoxin | DDQ68_RS05325 | Not Available | Negative | 1229959 - 1230414 | 16710.9 |
| heme no-binding domain-containing protein | DDQ68_RS05330 | Not Available | Negative | 1230438 - 1230977 | 20039.0 |
| anti-sigma factor domain-containing protein | DDQ68_RS05335 | Not Available | Negative | 1231128 - 1232078 | 33143.7 |
| rna polymerase sigma factor | DDQ68_RS05340 | Not Available | Negative | 1232086 - 1232646 | 21044.3 |
| nad-dependent succinate-semialdehyde dehydrogenase | DDQ68_RS05345 | Not Available | Positive | 1232814 - 1234211 | 49756.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
