Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DDQ68_RS05205 | Not Available | Positive | 1199358 - 1200902 | 57124.3 |
| ricin domain-containing protein | DDQ68_RS05210 | Not Available | Positive | 1201104 - 1202603 | 53000.6 |
| glycoside hydrolase | DDQ68_RS05215 | Not Available | Positive | 1202645 - 1204201 | 55436.7 |
| sugar-binding domain-containing protein | DDQ68_RS05220 | Not Available | Positive | 1204278 - 1206701 | 88382.2 |
| zn-dependent hydrolase | DDQ68_RS05225 | Not Available | Negative | 1207307 - 1208701 | 49216.7 |
| helix-turn-helix domain-containing protein | DDQ68_RS23380 | Not Available | Positive | 1209241 - 1209684 | 16788.3 |
| is630 family transposase | DDQ68_RS23385 | Not Available | Positive | 1209720 - 1210331 | 23982.4 |
| hypothetical protein | DDQ68_RS05235 | Not Available | Negative | 1210668 - 1211009 | 12404.0 |
| hypothetical protein | DDQ68_RS05240 | Not Available | Negative | 1211062 - 1211583 | 18885.3 |
| transporter | DDQ68_RS05245 | Not Available | Negative | 1211644 - 1212432 | 28711.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
