Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid pria4b orf-3 family protein | DDQ68_RS05155 | Not Available | Negative | 1178881 - 1179408 | 19118.4 |
| atp-binding protein | DDQ68_RS05160 | Not Available | Positive | 1179751 - 1182885 | 115354.0 |
| flavodoxin family protein | DDQ68_RS05165 | Not Available | Negative | 1183717 - 1184319 | 22019.3 |
| ynce family protein | DDQ68_RS05170 | Not Available | Negative | 1184726 - 1185715 | 35163.1 |
| is630 family transposase | DDQ68_RS23370 | Not Available | Negative | 1185900 - 1186511 | 23996.4 |
| helix-turn-helix domain-containing protein | DDQ68_RS23375 | Not Available | Negative | 1186547 - 1186990 | 16788.3 |
| sugar porter family mfs transporter | DDQ68_RS05180 | Not Available | Negative | 1187046 - 1188218 | 41503.7 |
| two-component regulator propeller domain-containing protein | DDQ68_RS05190 | Not Available | Negative | 1189540 - 1193787 | 155029.0 |
| glycoside hydrolase family 35 protein | DDQ68_RS05195 | Not Available | Positive | 1194092 - 1195990 | 69598.6 |
| susc/raga family tonb-linked outer membrane protein | DDQ68_RS05200 | Not Available | Positive | 1196216 - 1199335 | 111738.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
