Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system higb family toxin | DDQ68_RS05000 | Not Available | Positive | 1153665 - 1153880 | 8233.94 |
| helix-turn-helix domain-containing protein | DDQ68_RS05005 | Not Available | Positive | 1153919 - 1154272 | 13181.9 |
| hypothetical protein | DDQ68_RS05010 | Not Available | Positive | 1154631 - 1154864 | 8650.31 |
| replication initiation protein | DDQ68_RS05015 | Not Available | Negative | 1155044 - 1155343 | 11350.9 |
| alpha-amylase | DDQ68_RS05025 | Not Available | Negative | 1156658 - 1158463 | 65013.1 |
| transposase | DDQ68_RS05030 | Not Available | Positive | 1158850 - 1159221 | 13386.0 |
| is3 family transposase | DDQ68_RS05035 | Not Available | Positive | 1159317 - 1160054 | 28297.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | DDQ68_RS05040 | Not Available | Positive | 1160237 - 1160674 | 14840.4 |
| integrase core domain-containing protein | DDQ68_RS05045 | Not Available | Positive | 1160844 - 1161167 | 12537.9 |
| helix-turn-helix domain-containing protein | DDQ68_RS24625 | Not Available | Positive | 1161308 - 1161553 | 8767.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
