Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent hydrolase | DDQ68_RS04950 | Not Available | Positive | 1138255 - 1139601 | 47412.5 |
| fic family protein | DDQ68_RS04955 | Not Available | Positive | 1139973 - 1141094 | 42068.5 |
| sensor histidine kinase | DDQ68_RS04960 | Not Available | Negative | 1141096 - 1142478 | 50659.5 |
| sigma-54-dependent transcriptional regulator | DDQ68_RS04965 | Not Available | Negative | 1142468 - 1143838 | 49626.9 |
| hypothetical protein | DDQ68_RS04970 | Not Available | Negative | 1144080 - 1144550 | 16913.7 |
| efflux rnd transporter periplasmic adaptor subunit | DDQ68_RS04975 | Not Available | Positive | 1145004 - 1146263 | 46775.5 |
| abc transporter atp-binding protein | DDQ68_RS04980 | Not Available | Positive | 1146303 - 1146986 | 25354.5 |
| ftsx-like permease family protein | DDQ68_RS04985 | Not Available | Positive | 1147008 - 1149368 | 85969.7 |
| serine hydrolase domain-containing protein | DDQ68_RS04990 | Not Available | Positive | 1149816 - 1150907 | 40842.7 |
| alpha/beta hydrolase family protein | DDQ68_RS04995 | Not Available | Positive | 1151426 - 1153291 | 66295.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
