Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | DDQ68_RS04905 | Not Available | Negative | 1131261 - 1131476 | 8285.65 |
| hypothetical protein | DDQ68_RS22595 | Not Available | Negative | 1131473 - 1131757 | 10536.6 |
| is5/is1182 family transposase | DDQ68_RS04910 | Not Available | Negative | 1131848 - 1132701 | 30142.0 |
| outer membrane beta-barrel protein | DDQ68_RS04915 | Not Available | Negative | 1133179 - 1133913 | 25101.4 |
| duf6624 domain-containing protein | DDQ68_RS04920 | Not Available | Negative | 1134368 - 1135009 | 23921.7 |
| pin domain-containing protein | DDQ68_RS04925 | Not Available | Negative | 1135114 - 1135683 | 21059.7 |
| helix-turn-helix domain-containing protein | DDQ68_RS04930 | Not Available | Negative | 1135680 - 1136129 | 16483.0 |
| is630 family transposase | DDQ68_RS04935 | Not Available | Negative | 1136229 - 1136813 | 22417.3 |
| helix-turn-helix domain-containing protein | DDQ68_RS04940 | Not Available | Negative | 1136810 - 1137235 | 15386.3 |
| hypothetical protein | DDQ68_RS04945 | Not Available | Positive | 1137413 - 1137814 | 13760.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
