Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DDQ68_RS04800 | Not Available | Positive | 1111907 - 1112839 | 33009.5 |
| transposase | DDQ68_RS04805 | Not Available | Negative | 1113006 - 1114118 | 41809.4 |
| hypothetical protein | DDQ68_RS22585 | Not Available | Positive | 1114613 - 1114939 | 12121.2 |
| is5/is1182 family transposase | DDQ68_RS23710 | Not Available | Positive | 1115584 - 1116314 | 26195.5 |
| crispr-associated endonuclease cas2 | DDQ68_RS04830 | Not Available | Negative | 1118544 - 1118807 | 10465.0 |
| type i-b crispr-associated endonuclease cas1b | DDQ68_RS04835 | Not Available | Negative | 1118807 - 1119817 | 38920.0 |
| hypothetical protein | DDQ68_RS22590 | Not Available | Positive | 1119838 - 1119993 | 5648.64 |
| crispr-associated protein cas4 | DDQ68_RS04840 | Not Available | Negative | 1120004 - 1120507 | 19518.4 |
| crispr-associated protein cas7 | DDQ68_RS04845 | Not Available | Negative | 1120574 - 1121668 | 40536.0 |
| hypothetical protein | DDQ68_RS04850 | Not Available | Negative | 1121703 - 1123079 | 50811.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
