Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter nivis |
| Strain | strain NBRC 111535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
943307 bp
Thymine Count
941308 bp
Guanine Count
1573217 bp
Cytosine Count
1569765 bp
Genome Length
5027597 bp
Protein-coding Genes
4514 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper homeostasis protein cutc | DDQ68_RS00420 | Not Available | Positive | 77085 - 77789 | 23756.9 |
| d-alanine--d-alanine ligase | DDQ68_RS00425 | Not Available | Positive | 78059 - 80797 | 99033.7 |
| pasta domain-containing protein | DDQ68_RS00430 | Not Available | Positive | 80931 - 81695 | 27428.5 |
| t9ss type a sorting domain-containing protein | DDQ68_RS00435 | Not Available | Positive | 81985 - 83898 | 67452.0 |
| hypothetical protein | DDQ68_RS00440 | Not Available | Negative | 84000 - 84350 | 13133.3 |
| hypothetical protein | DDQ68_RS00445 | Not Available | Negative | 84437 - 85075 | 24098.1 |
| site-2 protease family protein | DDQ68_RS00450 | Not Available | Negative | 85231 - 86481 | 45439.9 |
| had family hydrolase | DDQ68_RS00455 | Not Available | Negative | 86474 - 87130 | 24476.1 |
| Trna-met | Not Available | Not Available | Positive | 87255 - 87328 | Not Available |
| hypothetical protein | DDQ68_RS00465 | Not Available | Negative | 87496 - 88116 | 23194.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
