Microbulbifer sp. A4B17

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Microbulbiferaceae

Genus

Microbulbifer

Description

Microbulbifer sp. A4B17 is a Gram-negative, rod-shaped bacterium that has been isolated from a tropical ascidian habitat. This organism is characterized by having a single replicon, which is an important trait in understanding its genetic structure and replication mechanisms. The specific accession number for Microbulbifer sp. A4B17 is NZ_CP029064.1, which provides a reference for its genetic sequencing and related studies. This accession can be utilized for further research into the genomic features of the species, allowing for comparisons with other members of the Microbulbifer genus. The presence of Microbulbifer sp. A4B17 in a tropical ascidian habitat suggests its potential role in the associated ecosystem, possibly involving interactions with the host organism or contributions to the microbial community structure. Microbulbifer species are known for their versatility and ability to degrade various organic compounds, which may imply that A4B17 could play a role in nutrient cycling within its ecological niche. Overall, the traits of Microbulbifer sp. A4B17 highlight its significance within its habitat, contributing to our understanding of microbial diversity and ecological functions in tropical marine environments. Further studies are warranted to elucidate its specific roles and interactions in this complex ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyMicrobulbiferaceae
GenusMicrobulbifer
SpeciesMicrobulbifer sp. A4B17
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitattropical ascidian
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbulbifer sp. A4B17 chromosome, complete genome.

Gene Summary

Adenine Count

1292464 bp

Thymine Count

1288585 bp

Guanine Count

1227106 bp

Cytosine Count

1227674 bp

Genome Length

5035829 bp

Protein-coding Genes

4307 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit uvrbBTJ40_RS14940Not AvailableNegative3380525 - 338253475961.4
Trna-asnNot AvailableNot AvailablePositive3382775 - 3382850Not Available
Trna-asnNot AvailableNot AvailablePositive3382897 - 3382972Not Available
polysaccharide biosynthesis proteinBTJ40_RS14955Not AvailableNegative3383095 - 338504772128.0
mray family glycosyltransferaseBTJ40_RS14960Not AvailableNegative3385103 - 338598432201.2
comea family dna-binding proteinBTJ40_RS14965Not AvailableNegative3386333 - 338664111159.5
orotidine-5'-phosphate decarboxylaseBTJ40_RS14970Not AvailableNegative3386782 - 338750124989.2
lipopolysaccharide assembly protein lapbBTJ40_RS14975Not AvailableNegative3387555 - 338874845169.1
lipopolysaccharide assembly protein lapa domain-containing proteinBTJ40_RS14980Not AvailableNegative3388750 - 338905811414.4
integration host factor subunit betaBTJ40_RS14985Not AvailableNegative3389154 - 338946211400.8

Displaying genes 2961 – 2970 of 4389 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.