Mangrovivirga cuniculi strain R1DC9

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Mangrovivirgaceae

Genus

Mangrovivirga

Description

Mangrovivirga cuniculi strain R1DC9 is characterized by a single replicon, indicative of its genetic structure. The strain is cataloged under the accession number NZ_CP028923.1, which provides a reference for its genomic data in biological databases. This organism's classification within the genus Mangrovivirga suggests a specific ecological niche, likely associated with mangrove ecosystems. Mangrovivirga species are generally known for their roles in nutrient cycling and potential symbiotic relationships within their environments. The unique adaptations of Mangrovivirga cuniculi strain R1DC9 could offer insights into microbial interactions in mangrove habitats, which are critical for coastal protection and biodiversity. Understanding the genetic traits and ecological roles of Mangrovivirga cuniculi R1DC9 can enhance knowledge of microbial community dynamics and their contributions to ecosystem functions in mangrove environments. This could have implications for conservation efforts and the management of coastal ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyMangrovivirgaceae
GenusMangrovivirga
SpeciesMangrovivirga cuniculi
Strainstrain R1DC9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mangrovivirga cuniculi strain R1DC9


Gene Summary

Adenine Count

1500705 bp

Thymine Count

1477034 bp

Guanine Count

845523 bp

Cytosine Count

838639 bp

Genome Length

4661901 bp

Protein-coding Genes

4155 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase 43 family proteinDCC35_RS00255Not AvailableNegative63058 - 6470461870.9
pectinesterase family proteinDCC35_RS20515Not AvailableNegative64709 - 6566535761.5
hypothetical proteinDCC35_RS20520Not AvailableNegative66406 - 6694519661.8
gluconate 5-dehydrogenaseDCC35_RS00265Not AvailableNegative66945 - 6773327935.8
5-dehydro-4-deoxy-d-glucuronate isomeraseDCC35_RS00270Not AvailableNegative67735 - 6857731444.1
hypothetical proteinDCC35_RS00275Not AvailablePositive68881 - 6942320586.1
hypothetical proteinDCC35_RS00280Not AvailablePositive70191 - 7060415399.3
t9ss type a sorting domain-containing proteinDCC35_RS00285Not AvailablePositive70608 - 73466103617.0
giy-yig nuclease family proteinDCC35_RS00290Not AvailableNegative73810 - 7406110085.1
Trna-metNot AvailableNot AvailablePositive74446 - 74521Not Available

Displaying genes 61 – 70 of 4218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.