Gemmobacter aquarius strain HYN0069

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paragemmobacter

Description

Gemmobacter aquarius strain HYN0069 is a distinctive bacterium characterized by its possession of two replicons, which are essential for its genetic stability and replication. The strain is cataloged under two specific accession numbers: NZ_CP028918.1 and NZ_CP028921.1. These accession numbers correspond to its genomic sequences, which provide detailed insights into its genetic makeup and potential functionalities. The presence of two replicons may suggest a complex regulatory and functional system that could enable Gemmobacter aquarius strain HYN0069 to adapt to various environmental conditions. This trait is particularly relevant in understanding its ecological role, as multiple replicons can facilitate metabolic versatility and resilience in fluctuating environments. The ecological implications of this strain are significant, as members of the Gemmobacter genus are typically associated with aquatic environments. Their metabolic capabilities may contribute to biogeochemical cycles, including nutrient cycling in aquatic ecosystems. The ability to thrive in such environments suggests that Gemmobacter aquarius strain HYN0069 plays a role in maintaining the health and stability of its ecological niche. Overall, the genomic characteristics of this strain, particularly its dual-replicon system, underscore its adaptability and potential ecological significance within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParagemmobacter
SpeciesParagemmobacter aquarius
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmobacter aquarius strain HYN0069 plasmid unnamed3, complete

Gene Summary

Adenine Count

6093 bp

Thymine Count

6062 bp

Guanine Count

8480 bp

Cytosine Count

8593 bp

Genome Length

29228 bp

Protein-coding Genes

34 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
winged helix dna-binding proteinHYN69_RS06770Not AvailablePositive1408231 - 140878520305.2
nad(p)-binding domain-containing proteinHYN69_RS06775Not AvailablePositive1408947 - 141031451603.8
apc family permeaseHYN69_RS06780Not AvailablePositive1410701 - 141246762755.6
aminomethyltransferase family proteinHYN69_RS06785Not AvailablePositive1412895 - 141403142031.2
dimethylamine monooxygenase subunit dmma family proteinHYN69_RS06790Not AvailablePositive1414112 - 141473222190.7
pdr/vanb family oxidoreductaseHYN69_RS06795Not AvailablePositive1414729 - 141569435085.1
heme-dependent oxidative n-demethylase family proteinHYN69_RS06800Not AvailablePositive1415707 - 141675041044.7
duf1989 domain-containing proteinHYN69_RS06805Not AvailablePositive1416772 - 141913585303.4
rhodanese-like domain-containing proteinHYN69_RS06810Not AvailableNegative1419140 - 141947211348.7
fggy-family carbohydrate kinaseHYN69_RS06815Not AvailableNegative1419522 - 142088947891.1

Displaying genes 1441 – 1450 of 3659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.