Gemmobacter aquarius strain HYN0069

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paragemmobacter

Description

Gemmobacter aquarius strain HYN0069 is a distinctive bacterium characterized by its possession of two replicons, which are essential for its genetic stability and replication. The strain is cataloged under two specific accession numbers: NZ_CP028918.1 and NZ_CP028921.1. These accession numbers correspond to its genomic sequences, which provide detailed insights into its genetic makeup and potential functionalities. The presence of two replicons may suggest a complex regulatory and functional system that could enable Gemmobacter aquarius strain HYN0069 to adapt to various environmental conditions. This trait is particularly relevant in understanding its ecological role, as multiple replicons can facilitate metabolic versatility and resilience in fluctuating environments. The ecological implications of this strain are significant, as members of the Gemmobacter genus are typically associated with aquatic environments. Their metabolic capabilities may contribute to biogeochemical cycles, including nutrient cycling in aquatic ecosystems. The ability to thrive in such environments suggests that Gemmobacter aquarius strain HYN0069 plays a role in maintaining the health and stability of its ecological niche. Overall, the genomic characteristics of this strain, particularly its dual-replicon system, underscore its adaptability and potential ecological significance within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParagemmobacter
SpeciesParagemmobacter aquarius
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmobacter aquarius strain HYN0069 plasmid unnamed3, complete

Gene Summary

Adenine Count

6093 bp

Thymine Count

6062 bp

Guanine Count

8480 bp

Cytosine Count

8593 bp

Genome Length

29228 bp

Protein-coding Genes

34 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit uvrcHYN69_RS00210Not AvailableNegative38065 - 3995769040.6
sdr family oxidoreductaseHYN69_RS00215Not AvailableNegative40270 - 4104627468.9
hypothetical proteinHYN69_RS00220Not AvailableNegative41049 - 411955018.41
s49 family peptidaseHYN69_RS00225Not AvailableNegative41225 - 4201928025.1
lysr family transcriptional regulatorHYN69_RS00230Not AvailablePositive42081 - 4297432119.2
formate dehydrogenase subunit gammaHYN69_RS00235Not AvailablePositive43216 - 4368616995.7
formate dehydrogenase beta subunitHYN69_RS00240Not AvailablePositive43687 - 4520452896.0
duf4287 domain-containing proteinHYN69_RS00245Not AvailablePositive45201 - 454137814.35
formate dehydrogenase subunit alphaHYN69_RS00250Not AvailablePositive45415 - 48291104678.0
formate dehydrogenase accessory sulfurtransferase fdhdHYN69_RS00255Not AvailablePositive48288 - 4909128277.0

Displaying genes 131 – 140 of 3659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.