Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 143 plasmid pTA143, complete sequence.
Gene Summary
Adenine Count
23726 bp
Thymine Count
24872 bp
Guanine Count
20272 bp
Cytosine Count
23875 bp
Genome Length
92745 bp
Protein-coding Genes
97 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sel1 repeat family protein | C9E67_RS23835 | Not Available | Negative | 4545769 - 4546344 | 21369.4 |
| rhs element core protein | C9E67_RS23840 | Not Available | Negative | 4546413 - 4550627 | 156939.0 |
| type vi secretion system tip protein vgrg | C9E67_RS23845 | Not Available | Negative | 4550703 - 4552844 | 79633.0 |
| hcp family type vi secretion system effector | C9E67_RS23850 | Not Available | Negative | 4553054 - 4553572 | 19256.8 |
| type vi secretion system contractile sheath small subunit | C9E67_RS23855 | Not Available | Positive | 4554269 - 4554769 | 18070.5 |
| hypothetical protein | C9E67_RS23860 | Not Available | Positive | 4554804 - 4555028 | 8411.01 |
| type vi secretion system contractile sheath large subunit | C9E67_RS23865 | Not Available | Positive | 4555079 - 4556470 | 52563.2 |
| type vi secretion system baseplate subunit tsse | C9E67_RS23870 | Not Available | Positive | 4556561 - 4556974 | 15510.1 |
| type vi secretion system baseplate subunit tssf | C9E67_RS23875 | Not Available | Positive | 4556978 - 4558828 | 71190.0 |
| type vi secretion system baseplate subunit tssg | C9E67_RS23880 | Not Available | Positive | 4558792 - 4559874 | 40232.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





