Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 143 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 143 plasmid pTA143, complete sequence.
Gene Summary
Adenine Count
23726 bp
Thymine Count
24872 bp
Guanine Count
20272 bp
Cytosine Count
23875 bp
Genome Length
92745 bp
Protein-coding Genes
97 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | C9E67_RS22705 | Not Available | Negative | 4318302 - 4318772 | 16157.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9E67_RS22710 | Not Available | Negative | 4318861 - 4319964 | 40366.7 |
| transcriptional regulator nrdr | C9E67_RS22715 | Not Available | Negative | 4319968 - 4320417 | 17229.9 |
| duf3251 domain-containing protein | C9E67_RS22720 | Not Available | Positive | 4320568 - 4321107 | 19603.6 |
| nucleoside-specific channel-forming protein tsx | C9E67_RS22725 | Not Available | Positive | 4321406 - 4322290 | 33590.6 |
| hnh nuclease yajd | C9E67_RS22730 | Not Available | Negative | 4322467 - 4322814 | 13364.7 |
| type ii toxin-antitoxin system rele/pare family toxin | C9E67_RS22735 | Not Available | Negative | 4322902 - 4323183 | 10993.2 |
| type ii toxin-antitoxin system pard family antitoxin | C9E67_RS22740 | Not Available | Negative | 4323176 - 4323418 | 8997.73 |
| protein translocase subunit secf | C9E67_RS22750 | Not Available | Negative | 4323569 - 4324540 | 35384.6 |
| protein translocase subunit secd | C9E67_RS22755 | Not Available | Negative | 4324551 - 4326398 | 66636.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





