Yersinia massiliensis strain GTA

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia massiliensis strain GTA is a rod-shaped bacterium that possesses flagella, indicating its capability for motility. This strain has been characterized by its possession of two replicons, which are essential for its genetic replication and maintenance. The strain is cataloged with two specific accession numbers: NZ_CP028488.1 and NZ_CP028487.1, which are useful for researchers looking to access its genomic data for further studies. The presence of flagella suggests that Yersinia massiliensis strain GTA may exhibit a level of environmental adaptability, allowing it to navigate through various ecological niches. This motility can potentially facilitate interactions with other microorganisms and host organisms, influencing its ecological role and survival strategies in diverse environments. As a member of the Yersinia genus, it is important to consider the ecological implications of this strain in relation to its pathogenic potential, although specific pathogenic traits are not detailed in the provided information. Understanding the traits of Yersinia massiliensis strain GTA can contribute to a broader comprehension of the dynamics of Yersinia species in microbial communities and their interactions with the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia massiliensis
Strainstrain GTA

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia massiliensis strain GTA
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia massiliensis strain GTA chromosome, complete genome.

Gene Summary

Adenine Count

1303556 bp

Thymine Count

1305292 bp

Guanine Count

1184669 bp

Cytosine Count

1192484 bp

Genome Length

4986001 bp

Protein-coding Genes

4131 genes

Non-Coding Genes

433 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine carboxypeptidase dacaDA391_RS16270Not AvailablePositive3478205 - 347941644280.3
duf493 family protein ybedDA391_RS16275Not AvailablePositive3479562 - 34798259790.83
lipoyl(octanoyl) transferase lipbDA391_RS16280Not AvailablePositive3480077 - 348076325503.1
lipoyl synthaseDA391_RS16285Not AvailablePositive3480939 - 348190436092.8
sec-independent protein translocase subunit tataDA391_RS16290Not AvailableNegative3482128 - 34823497553.24
diguanylate cyclaseDA391_RS16295Not AvailablePositive3482553 - 348360539151.7
fluoride efflux transporter crcbDA391_RS16300Not AvailablePositive3483840 - 348422313441.9
transcription antiterminator/rna stability regulator cspeDA391_RS16305Not AvailableNegative3484503 - 34847127365.72
cold-shock proteinDA391_RS16310Not AvailablePositive3484990 - 348546917922.5
helix-turn-helix transcriptional regulatorDA391_RS16315Not AvailableNegative3485649 - 348623922415.4

Displaying genes 3271 – 3280 of 4688 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.