Pantoea vagans strain PV989

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea vagans strain PV989 is a Gram-negative bacterium characterized by its rod shape and facultative anaerobic metabolism. This strain is notable for its presence in host-associated habitats, indicating a potential relationship with various organisms, possibly as a plant or animal symbiont. PV989 is non-motile, which suggests that it relies on other mechanisms for dispersal or may be adapted to a specific niche within its host environment. It possesses flagella, which are typically associated with motility, but in this case, their role may be more related to interaction with surfaces or other microorganisms rather than locomotion. This strain is mesophilic, indicating an optimal growth temperature range that aligns with many biological systems, particularly in temperate climates. Pantoea vagans strain PV989 has three replicons, which may contribute to its genetic diversity and adaptability in various environments. The presence of two membranes is characteristic of Gram-negative bacteria, providing a structural barrier and influencing its interactions with the surrounding environment. Pantoea vagans strain PV989 does not form spores, which is a trait shared by many bacteria that inhabit stable environments or host associations. The free-living biotic relationship implies that this strain can survive independently, potentially contributing to soil health or plant growth. In summary, Pantoea vagans strain PV989 exemplifies a bacterium adapted to host-associated environments, with specific traits that highlight its ecological role and interactions within its habitat. Its adaptability and structural characteristics may allow it to thrive in diverse ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea vagans
Strainstrain PV989

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea vagans strain PV989
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence.

Gene Summary

Adenine Count

39480 bp

Thymine Count

38812 bp

Guanine Count

43964 bp

Cytosine Count

44381 bp

Genome Length

166637 bp

Protein-coding Genes

143 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseC9381_RS20470Not AvailablePositive274821 - 27563630294.5
abc transporter atp-binding proteinC9381_RS20475Not AvailablePositive275633 - 27641829198.4
urea amidolyase associated protein uaap1C9381_RS20480Not AvailablePositive276415 - 27714326827.9
urea amidolyase associated protein uaap2C9381_RS20485Not AvailablePositive277154 - 27778923738.1
urea carboxylaseC9381_RS20490Not AvailablePositive277900 - 281505130588.0
lysr substrate-binding domain-containing proteinC9381_RS20495Not AvailableNegative281613 - 28251833332.4
2og-fe(ii) oxygenase family proteinC9381_RS20500Not AvailablePositive282618 - 28339128820.0
duf2817 domain-containing proteinC9381_RS20505Not AvailableNegative283394 - 28446739598.5
abc transporter substrate-binding proteinC9381_RS20510Not AvailableNegative284502 - 28527227642.3
lysr family transcriptional regulatorC9381_RS20515Not AvailableNegative285620 - 28653133237.1

Displaying genes 411 – 420 of 710 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.