Novosphingobium sp. THN1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. THN1 is a notable bacterium characterized by the presence of flagella, which contributes to its motility. This trait allows Novosphingobium sp. THN1 to navigate its environment effectively, potentially aiding in nutrient acquisition and colonization. Genetically, Novosphingobium sp. THN1 is distinguished by having two replicons, indicating a complex genomic structure that may allow for greater adaptability and resilience under varying environmental conditions. The genetic information for Novosphingobium sp. THN1 is cataloged under the accessions NZ_CP028347.1 and NZ_CP028348.1, which provides a basis for further research into its genomic characteristics and functional capabilities. Ecologically, the motility conferred by flagella, combined with its genomic adaptability, suggests that Novosphingobium sp. THN1 may play a role in biogeochemical processes within its habitat. The ability to move and potentially colonize various niches could enable this bacterium to participate in the degradation of organic compounds or contribute to nutrient cycling, although specific ecological functions require further investigation. This highlights the importance of studying such microorganisms for their potential roles in environmental microbiology and bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. THN1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. THN1 chromosome, complete genome.

Gene Summary

Adenine Count

636638 bp

Thymine Count

632696 bp

Guanine Count

1114286 bp

Cytosine Count

1103894 bp

Genome Length

3487514 bp

Protein-coding Genes

3461 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s13C7W88_RS15500Not AvailableNegative3156421 - 315678913688.9
hypothetical proteinC7W88_RS15505Not AvailablePositive3157099 - 31573418795.7
doxx family proteinC7W88_RS15510Not AvailablePositive3157419 - 315782614860.7
hypothetical proteinC7W88_RS24850Not AvailablePositive3157922 - 315827512499.2
transglutaminase-like domain-containing proteinC7W88_RS24855Not AvailablePositive3158221 - 315869416362.3
pqq-dependent sugar dehydrogenaseC7W88_RS15525Not AvailableNegative3158677 - 315990042588.6
rela/spot family proteinC7W88_RS15530Not AvailableNegative3160019 - 316210678516.6
gnat family n-acetyltransferaseC7W88_RS15535Not AvailableNegative3162181 - 316280122859.0
oxygen-dependent coproporphyrinogen oxidaseC7W88_RS15540Not AvailableNegative3162806 - 316366932215.6
ligase-associated dna damage response endonuclease pdemC7W88_RS15545Not AvailablePositive3163732 - 316440624262.1

Displaying genes 3271 – 3280 of 4672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.