Novosphingobium sp. THN1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. THN1 is a notable bacterium characterized by the presence of flagella, which contributes to its motility. This trait allows Novosphingobium sp. THN1 to navigate its environment effectively, potentially aiding in nutrient acquisition and colonization. Genetically, Novosphingobium sp. THN1 is distinguished by having two replicons, indicating a complex genomic structure that may allow for greater adaptability and resilience under varying environmental conditions. The genetic information for Novosphingobium sp. THN1 is cataloged under the accessions NZ_CP028347.1 and NZ_CP028348.1, which provides a basis for further research into its genomic characteristics and functional capabilities. Ecologically, the motility conferred by flagella, combined with its genomic adaptability, suggests that Novosphingobium sp. THN1 may play a role in biogeochemical processes within its habitat. The ability to move and potentially colonize various niches could enable this bacterium to participate in the degradation of organic compounds or contribute to nutrient cycling, although specific ecological functions require further investigation. This highlights the importance of studying such microorganisms for their potential roles in environmental microbiology and bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. THN1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. THN1 chromosome, complete genome.

Gene Summary

Adenine Count

636638 bp

Thymine Count

632696 bp

Guanine Count

1114286 bp

Cytosine Count

1103894 bp

Genome Length

3487514 bp

Protein-coding Genes

3461 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ykgj family cysteine cluster proteinC7W88_RS14535Not AvailablePositive2925616 - 292615820297.3
ykgj family cysteine cluster proteinC7W88_RS14540Not AvailablePositive2926543 - 292715422689.1
ykgj family cysteine cluster proteinC7W88_RS14545Not AvailablePositive2927220 - 292776820120.1
nad(p)h-dependent flavin oxidoreductaseC7W88_RS14550Not AvailableNegative2927819 - 292922851935.6
class i sam-dependent methyltransferaseC7W88_RS14555Not AvailableNegative2929228 - 292999828021.6
peptide chain release factor 2C7W88_RS14560Not AvailableNegative2929998 - 293112541428.4
peroxiredoxinC7W88_RS14565Not AvailableNegative2931236 - 293178119050.0
penicillin-binding protein 1aC7W88_RS14570Not AvailableNegative2931846 - 293438093031.0
n-acetylmuramoyl-l-alanine amidaseC7W88_RS14575Not AvailableNegative2934443 - 293542034093.6
ribonuclease e/gC7W88_RS14580Not AvailablePositive2935964 - 2938765102584.0

Displaying genes 3071 – 3080 of 4672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.