Novosphingobium sp. THN1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. THN1 is a notable bacterium characterized by the presence of flagella, which contributes to its motility. This trait allows Novosphingobium sp. THN1 to navigate its environment effectively, potentially aiding in nutrient acquisition and colonization. Genetically, Novosphingobium sp. THN1 is distinguished by having two replicons, indicating a complex genomic structure that may allow for greater adaptability and resilience under varying environmental conditions. The genetic information for Novosphingobium sp. THN1 is cataloged under the accessions NZ_CP028347.1 and NZ_CP028348.1, which provides a basis for further research into its genomic characteristics and functional capabilities. Ecologically, the motility conferred by flagella, combined with its genomic adaptability, suggests that Novosphingobium sp. THN1 may play a role in biogeochemical processes within its habitat. The ability to move and potentially colonize various niches could enable this bacterium to participate in the degradation of organic compounds or contribute to nutrient cycling, although specific ecological functions require further investigation. This highlights the importance of studying such microorganisms for their potential roles in environmental microbiology and bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. THN1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. THN1 chromosome, complete genome.

Gene Summary

Adenine Count

636638 bp

Thymine Count

632696 bp

Guanine Count

1114286 bp

Cytosine Count

1103894 bp

Genome Length

3487514 bp

Protein-coding Genes

3461 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sterol desaturase family proteinC7W88_RS10000Not AvailableNegative2003819 - 200433419330.7
hypothetical proteinC7W88_RS10005Not AvailablePositive2004470 - 200485014421.0
3-isopropylmalate dehydratase large subunitC7W88_RS10010Not AvailablePositive2004960 - 200639950983.6
hypothetical proteinC7W88_RS10015Not AvailablePositive2006407 - 200693718580.0
zinc ribbon domain-containing proteinC7W88_RS10020Not AvailablePositive2007126 - 200820840384.9
dna-deoxyinosine glycosylaseC7W88_RS10025Not AvailablePositive2008205 - 200864815698.7
lpxtg cell wall anchor domain-containing proteinC7W88_RS10030Not AvailablePositive2008762 - 20089235517.53
3-isopropylmalate dehydratase small subunitC7W88_RS10035Not AvailablePositive2009088 - 200969621780.0
nadph:quinone oxidoreductase family proteinC7W88_RS10040Not AvailablePositive2009786 - 201078735169.5
trimeric intracellular cation channel family proteinC7W88_RS10045Not AvailableNegative2010837 - 201148122086.4

Displaying genes 2161 – 2170 of 4672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.