Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Oxalobacteraceae
Genus	Pseudoduganella
Species	Pseudoduganella armeniaca
Strain	strain ZMN-3

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	desert soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

NZ_CP028324.1

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
glycoside hydrolase family 65 protein	C9I28_RS23950	Not Available	Negative	5504402 - 5506815	88085.3
hypothetical protein	C9I28_RS23955	Not Available	Negative	5506935 - 5507411	16519.3
hypothetical protein	C9I28_RS23960	Not Available	Positive	5507583 - 5509034	49152.7
branched-chain amino acid abc transporter substrate-binding protein	C9I28_RS23965	Not Available	Positive	5509111 - 5510241	38864.5
sensor domain-containing diguanylate cyclase	C9I28_RS23970	Not Available	Negative	5510313 - 5511515	44471.3
aldo/keto reductase	C9I28_RS23975	Not Available	Positive	5511927 - 5512907	34946.8
lysr family transcriptional regulator	C9I28_RS23980	Not Available	Positive	5512985 - 5513914	33921.9
lysr family transcriptional regulator	C9I28_RS23985	Not Available	Negative	5513881 - 5514816	33285.3
pirin family protein	C9I28_RS23990	Not Available	Positive	5514914 - 5515750	29458.9
sdr family oxidoreductase	C9I28_RS23995	Not Available	Negative	5515804 - 5516550	26710.6

Displaying genes 4911 – 4920 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.