Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella armeniaca
Strainstrain ZMN-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdesert soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribokinaseC9I28_RS19260Not AvailableNegative4440021 - 444091129213.4
laci family dna-binding transcriptional regulatorC9I28_RS19265Not AvailableNegative4440908 - 444193636060.3
abc transporter permeaseC9I28_RS19270Not AvailableNegative4441950 - 444290933312.9
sugar abc transporter atp-binding proteinC9I28_RS19275Not AvailableNegative4442929 - 444448855560.1
sugar abc transporter substrate-binding proteinC9I28_RS19280Not AvailableNegative4444567 - 444552633143.7
glycoside hydrolase family 65 proteinC9I28_RS29010Not AvailablePositive4445760 - 44459577622.42
duf4345 domain-containing proteinC9I28_RS19290Not AvailableNegative4446182 - 444661014853.8
sulfurtransferaseC9I28_RS19295Not AvailableNegative4446698 - 444761832535.4
Trna-glyNot AvailableNot AvailablePositive4447670 - 4447745Not Available
Trna-cysNot AvailableNot AvailablePositive4447787 - 4447860Not Available

Displaying genes 3951 – 3960 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.