Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella armeniaca
Strainstrain ZMN-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdesert soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-xylose abc transporter substrate-binding proteinC9I28_RS19165Not AvailableNegative4418656 - 441966035386.7
aldose epimerase family proteinC9I28_RS19170Not AvailableNegative4419760 - 442080937915.7
xylr family transcriptional regulatorC9I28_RS19175Not AvailableNegative4420821 - 442204145098.4
ncs2 family permeaseC9I28_RS19180Not AvailablePositive4422353 - 442369646043.6
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdC9I28_RS19185Not AvailableNegative4423693 - 442478137413.3
wd40 repeat domain-containing proteinC9I28_RS19190Not AvailableNegative4424916 - 442647555394.2
hypothetical proteinC9I28_RS29000Not AvailablePositive4426467 - 442690416104.5
hd domain-containing proteinC9I28_RS29005Not AvailablePositive4427060 - 442853853206.7
gtp cyclohydrolase ii ribaC9I28_RS19200Not AvailablePositive4428569 - 442923724373.2
formylglycine-generating enzyme family proteinC9I28_RS19205Not AvailablePositive4429249 - 443026236371.9

Displaying genes 3931 – 3940 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.