Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Oxalobacteraceae
Genus	Pseudoduganella
Species	Pseudoduganella armeniaca
Strain	strain ZMN-3

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	desert soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

NZ_CP028324.1

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
1-deoxy-d-xylulose-5-phosphate reductoisomerase	C9I28_RS17415	Not Available	Negative	4008173 - 4009378	42136.0
glycoside hydrolase family 65 protein	C9I28_RS28930	Not Available	Negative	4009458 - 4010290	30114.2
polyprenyl diphosphate synthase	C9I28_RS17425	Not Available	Negative	4010295 - 4011044	28287.9
ribosome recycling factor	C9I28_RS17430	Not Available	Negative	4011155 - 4011715	20660.8
ump kinase	C9I28_RS17435	Not Available	Negative	4011743 - 4012459	25298.0
translation elongation factor ts	C9I28_RS17440	Not Available	Negative	4012685 - 4013599	31900.3
30s ribosomal protein s2	C9I28_RS17445	Not Available	Negative	4013770 - 4014522	27513.4
pep-cterm sorting domain-containing protein	C9I28_RS17450	Not Available	Positive	4015042 - 4015599	19838.5
dna-binding protein	C9I28_RS17455	Not Available	Negative	4015727 - 4016428	25683.1
hypothetical protein	C9I28_RS17460	Not Available	Positive	4016612 - 4016950	12279.5

Displaying genes 3571 – 3580 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.