Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Oxalobacteraceae
Genus	Pseudoduganella
Species	Pseudoduganella armeniaca
Strain	strain ZMN-3

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	desert soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

NZ_CP028324.1

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
is1595 family transposase	C9I28_RS14985	Not Available	Negative	3450057 - 3451031	35886.4
duf4214 domain-containing protein	C9I28_RS14990	Not Available	Positive	3451222 - 3452928	59415.4
sensor domain-containing diguanylate cyclase	C9I28_RS14995	Not Available	Negative	3452947 - 3453942	36489.7
sensor histidine kinase	C9I28_RS15000	Not Available	Negative	3454062 - 3455075	35550.9
7-carboxy-7-deazaguanine synthase	C9I28_RS15005	Not Available	Positive	3455271 - 3455906	22818.3
6-carboxytetrahydropterin synthase qued	C9I28_RS15010	Not Available	Positive	3455916 - 3456362	16569.9
trna adenosine(34) deaminase tada	C9I28_RS15015	Not Available	Positive	3456366 - 3456887	17839.5
glycoside hydrolase family 65 protein	C9I28_RS15020	Not Available	Positive	3456943 - 3457859	32799.8
choice-of-anchor e domain-containing protein	C9I28_RS28840	Not Available	Negative	3457920 - 3458606	23027.2
glycoside hydrolase family 65 protein	C9I28_RS15030	Not Available	Positive	3458802 - 3460399	58103.2

Displaying genes 3061 – 3070 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.