Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Oxalobacteraceae
Genus	Pseudoduganella
Species	Pseudoduganella armeniaca
Strain	strain ZMN-3

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	desert soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

NZ_CP028324.1

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
lysr family transcriptional regulator	C9I28_RS14635	Not Available	Negative	3364532 - 3365437	32708.2
malate synthase a	C9I28_RS14640	Not Available	Positive	3365558 - 3367150	58878.8
2-hydroxychromene-2-carboxylate isomerase	C9I28_RS14645	Not Available	Negative	3367167 - 3367814	23618.7
hydroxyacylglutathione hydrolase	C9I28_RS14650	Not Available	Negative	3367827 - 3368612	28034.7
class i sam-dependent methyltransferase	C9I28_RS14655	Not Available	Positive	3368654 - 3369451	29301.3
ribonuclease hi	C9I28_RS14660	Not Available	Positive	3369484 - 3369924	16262.3
dna polymerase iii subunit epsilon	C9I28_RS14665	Not Available	Positive	3369979 - 3370680	25920.9
Trna-val	Not Available	Not Available	Positive	3370727 - 3370801	Not Available
hypothetical protein	C9I28_RS14675	Not Available	Negative	3371019 - 3371273	9149.57
antibiotic biosynthesis monooxygenase family protein	C9I28_RS14680	Not Available	Negative	3372166 - 3372471	12033.5

Displaying genes 2991 – 3000 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.