Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Oxalobacteraceae
Genus	Pseudoduganella
Species	Pseudoduganella armeniaca
Strain	strain ZMN-3

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	desert soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

NZ_CP028324.1

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
sensor histidine kinase	C9I28_RS14435	Not Available	Negative	3317326 - 3318774	51761.7
response regulator transcription factor	C9I28_RS14440	Not Available	Negative	3318783 - 3319484	25647.1
spy/cpxp family protein refolding chaperone	C9I28_RS14445	Not Available	Positive	3319679 - 3320248	20094.0
intradiol ring-cleavage dioxygenase	C9I28_RS14450	Not Available	Positive	3320268 - 3321170	30590.2
hypothetical protein	C9I28_RS14455	Not Available	Positive	3321357 - 3321947	21569.8
hypothetical protein	C9I28_RS14460	Not Available	Positive	3321979 - 3322719	24665.0
hypothetical protein	C9I28_RS14465	Not Available	Positive	3322725 - 3324026	48112.7
8-amino-7-oxononanoate synthase	C9I28_RS14470	Not Available	Positive	3324023 - 3326203	81586.2
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme	C9I28_RS14475	Not Available	Positive	3326200 - 3327246	36888.9
giy-yig nuclease family protein	C9I28_RS14480	Not Available	Positive	3327243 - 3328031	27890.0

Displaying genes 2951 – 2960 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.