Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella armeniaca
Strainstrain ZMN-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdesert soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-amino acid dehydrogenaseC9I28_RS12780Not AvailableNegative2926629 - 292791246504.1
lrp/asnc ligand binding domain-containing proteinC9I28_RS12785Not AvailablePositive2928016 - 292850718442.6
gnat family n-acetyltransferaseC9I28_RS12790Not AvailableNegative2928470 - 292895518159.7
dmt family transporterC9I28_RS12795Not AvailableNegative2928982 - 292981228724.8
hypothetical proteinC9I28_RS28760Not AvailablePositive2929998 - 293077127081.5
hypothetical proteinC9I28_RS28765Not AvailablePositive2930750 - 293158030901.2
hypothetical proteinC9I28_RS12805Not AvailablePositive2931692 - 293215316662.7
nad(p)/fad-dependent oxidoreductaseC9I28_RS12810Not AvailablePositive2932200 - 293350145907.5
cytochrome p450C9I28_RS12815Not AvailableNegative2933488 - 293487649003.7
helix-turn-helix domain-containing proteinC9I28_RS12820Not AvailablePositive2935042 - 293591731858.5

Displaying genes 2611 – 2620 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.