Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella armeniaca
Strainstrain ZMN-3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdesert soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arac family transcriptional regulatorC9I28_RS00835Not AvailablePositive191840 - 19274232282.5
histidine triad nucleotide-binding proteinC9I28_RS00840Not AvailableNegative192816 - 19318713463.4
phosphoribosyl-atp diphosphataseC9I28_RS00845Not AvailableNegative193217 - 19355511947.3
phosphoribosyl-amp cyclohydrolaseC9I28_RS00850Not AvailableNegative193552 - 19399216595.7
imidazole glycerol phosphate synthase subunit hisfC9I28_RS00855Not AvailableNegative194006 - 19476726730.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseC9I28_RS00860Not AvailableNegative194769 - 19556628339.8
imidazole glycerol phosphate synthase subunit hishC9I28_RS00865Not AvailableNegative195602 - 19623723272.8
imidazoleglycerol-phosphate dehydratase hisbC9I28_RS00870Not AvailableNegative196257 - 19685621923.1
histidinol-phosphate transaminaseC9I28_RS00875Not AvailableNegative196877 - 19796539221.7
dna-methyltransferaseC9I28_RS00880Not AvailableNegative197971 - 19884932780.1

Displaying genes 171 – 180 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.