Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Oxalobacteraceae
Genus	Pseudoduganella
Species	Pseudoduganella armeniaca
Strain	strain ZMN-3

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	desert soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

NZ_CP028324.1

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
yqjd family protein	C9I28_RS06870	Not Available	Negative	1553011 - 1553388	13321.7
4-hydroxybenzoate octaprenyltransferase	C9I28_RS06875	Not Available	Negative	1553486 - 1554367	31929.5
hydrogen peroxide-inducible genes activator	C9I28_RS06880	Not Available	Negative	1554387 - 1555328	34291.1
adenylyltransferase/cytidyltransferase family protein	C9I28_RS06885	Not Available	Positive	1555413 - 1555904	17409.8
duf421 domain-containing protein	C9I28_RS06890	Not Available	Negative	1555885 - 1556343	16803.8
rep-associated tyrosine transposase	C9I28_RS06895	Not Available	Negative	1556448 - 1557233	29235.5
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml	C9I28_RS06900	Not Available	Negative	1557439 - 1557909	17489.8
comf family protein	C9I28_RS06905	Not Available	Negative	1557926 - 1558453	18874.2
methyltransferase domain-containing protein	C9I28_RS06910	Not Available	Positive	1558713 - 1559636	33705.0
cytochrome c oxidase subunit ii	C9I28_RS06915	Not Available	Positive	1559989 - 1561227	44801.9

Displaying genes 1401 – 1410 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.