Pseudoduganella armeniaca strain ZMN-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella armeniaca strain ZMN-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. This strain has been cataloged with the accession number NZ_CP028324.1, which allows for its identification and retrieval in genomic databases. The significance of Pseudoduganella armeniaca lies in its potential ecological roles, particularly in biochemical processes within its habitat. As a member of the microbial community, it may participate in nutrient cycling and contribute to the overall health and stability of its ecosystem. Understanding the traits of Pseudoduganella armeniaca strain ZMN-3 can provide insights into the functional diversity of microorganisms and their interactions within the environment.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Oxalobacteraceae
Genus	Pseudoduganella
Species	Pseudoduganella armeniaca
Strain	strain ZMN-3

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	desert soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudoduganella armeniaca strain ZMN-3 chromosome, complete

NZ_CP028324.1

Gene Summary

Adenine Count

1066255 bp

Thymine Count

1066681 bp

Guanine Count

2105347 bp

Cytosine Count

2099208 bp

Genome Length

6337491 bp

Protein-coding Genes

5541 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
glycoside hydrolase family 65 protein	C9I28_RS05740	Not Available	Positive	1308297 - 1310623	83454.2
hpt domain-containing protein	C9I28_RS05745	Not Available	Positive	1310687 - 1316173	195823.0
s41 family peptidase	C9I28_RS05750	Not Available	Negative	1316246 - 1317529	45460.3
cryptochrome/photolyase family protein	C9I28_RS05755	Not Available	Negative	1317642 - 1319063	52080.4
yqge/algh family protein	C9I28_RS05760	Not Available	Positive	1319276 - 1319932	23500.3
holliday junction resolvase ruvx	C9I28_RS05765	Not Available	Positive	1319925 - 1320335	15047.2
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr	C9I28_RS05770	Not Available	Positive	1320344 - 1320865	18670.3
aspartate carbamoyltransferase catalytic subunit	C9I28_RS05775	Not Available	Positive	1320858 - 1321823	35030.5
dihydroorotase	C9I28_RS05780	Not Available	Positive	1321842 - 1323146	45347.5
lysophospholipid acyltransferase family protein	C9I28_RS05785	Not Available	Positive	1323159 - 1323968	29647.0

Displaying genes 1171 – 1180 of 5649 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.