Vibrio parahaemolyticus strain R14

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio parahaemolyticus strain R14 is a Gram-negative, rod-shaped bacterium that thrives in aquatic environments. As a heterotroph, it derives energy from organic compounds and exhibits facultative anaerobic respiration, allowing it to survive in varying oxygen conditions. This strain has a single replicon and is characterized by the presence of two membranes and flagella, which confer mobility. Optimal growth occurs at 20°C, placing Vibrio parahaemolyticus within the mesophilic temperature range. This organism is free-living, engaging in various biotic relationships, and has numerous hosts, including Homo sapiens, Danio rerio, and several marine invertebrates like Ruditapes philippinarum and Penaeus vannamei. Vibrio parahaemolyticus strain R14 is notable for its pathogenic potential in humans, associated with a range of health effects such as ear infections, wound infections, and various gastrointestinal diseases, including vibriosis and gastroenteritis. These health effects highlight the bacterium's role in foodborne illnesses, often linked to the consumption of contaminated seafood. The strain is implicated in acute hepatopancreatic necrosis disease, which affects certain marine species. The ecological significance of Vibrio parahaemolyticus strain R14 lies in its adaptability to aquatic environments and its interactions with both marine organisms and humans. Understanding its pathogenicity and ecological role can inform public health strategies and seafood safety measures, addressing the risks of Vibrio-related infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio parahaemolyticus
Strainstrain R14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Vibrio parahaemolyticus strain R14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Homo sapiens, Danio rerio, Pancrustacea
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio parahaemolyticus strain R14 chromosome 2, complete

Gene Summary

Adenine Count

497153 bp

Thymine Count

494654 bp

Guanine Count

412326 bp

Cytosine Count

413907 bp

Genome Length

1818040 bp

Protein-coding Genes

1586 genes

Non-Coding Genes

17 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m6 family metalloprotease domain-containing proteinC9I78_RS19400Not AvailableNegative433283 - 436318112392.0
m9 family metallopeptidaseC9I78_RS19405Not AvailablePositive436584 - 43884284798.4
eal domain-containing proteinC9I78_RS19410Not AvailablePositive439022 - 43975928586.1
ribosome biogenesis gtpase ylqfC9I78_RS19415Not AvailablePositive440048 - 44099236079.8
alpha-hydroxyketone-type quorum-sensing autoinducer synthaseC9I78_RS19420Not AvailablePositive441346 - 44252743910.9
response regulatorC9I78_RS19425Not AvailableNegative442605 - 44465378291.4
had family hydrolaseC9I78_RS19430Not AvailablePositive444973 - 44559023349.9
gnat family n-acetyltransferaseC9I78_RS19435Not AvailableNegative445676 - 44622421046.8
acyl-coa desaturaseC9I78_RS19440Not AvailablePositive446496 - 44762044133.8
anaerobic c4-dicarboxylate transporter dcucC9I78_RS19445Not AvailablePositive447974 - 44934147119.4

Displaying genes 391 – 400 of 1603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
VibriosisCausesPMC10472736
Acute gastroenteritisCausesPMC11171697
Wound infectionsCausesPMC11171697
SepticemiaCausesPMC11171697
Food poisoningCausesPMC12108532
Vibrio infectionsCausesPMC12108532
Acute gastroenteritisCausesPMC12849298
Wound infectionsCausesPMC12849298
Ear infectionsCausesPMC12849298
SepticemiaCausesPMC12849298

Displaying health effects 1 – 10 of 23 in total