Vibrio parahaemolyticus strain R14

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio parahaemolyticus strain R14 is a Gram-negative, rod-shaped bacterium that thrives in aquatic environments. As a heterotroph, it derives energy from organic compounds and exhibits facultative anaerobic respiration, allowing it to survive in varying oxygen conditions. This strain has a single replicon and is characterized by the presence of two membranes and flagella, which confer mobility. Optimal growth occurs at 20°C, placing Vibrio parahaemolyticus within the mesophilic temperature range. This organism is free-living, engaging in various biotic relationships, and has numerous hosts, including Homo sapiens, Danio rerio, and several marine invertebrates like Ruditapes philippinarum and Penaeus vannamei. Vibrio parahaemolyticus strain R14 is notable for its pathogenic potential in humans, associated with a range of health effects such as ear infections, wound infections, and various gastrointestinal diseases, including vibriosis and gastroenteritis. These health effects highlight the bacterium's role in foodborne illnesses, often linked to the consumption of contaminated seafood. The strain is implicated in acute hepatopancreatic necrosis disease, which affects certain marine species. The ecological significance of Vibrio parahaemolyticus strain R14 lies in its adaptability to aquatic environments and its interactions with both marine organisms and humans. Understanding its pathogenicity and ecological role can inform public health strategies and seafood safety measures, addressing the risks of Vibrio-related infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio parahaemolyticus
Strainstrain R14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Vibrio parahaemolyticus strain R14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Homo sapiens, Danio rerio, Pancrustacea
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio parahaemolyticus strain R14


Gene Summary

Adenine Count

497153 bp

Thymine Count

494654 bp

Guanine Count

412326 bp

Cytosine Count

413907 bp

Genome Length

1818040 bp

Protein-coding Genes

1586 genes

Non-Coding Genes

17 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eal domain-containing proteinC9I78_RS17375Not AvailableNegative9483 - 1184689775.0
d-ribose pyranaseC9I78_RS17380Not AvailablePositive12322 - 1274115255.2
ribose abc transporter atp-binding protein rbsaC9I78_RS17385Not AvailablePositive12764 - 1426954749.6
ribose abc transporter permeaseC9I78_RS17390Not AvailablePositive14266 - 1524934318.0
ribose abc transporter substrate-binding protein rbsbC9I78_RS17395Not AvailablePositive15335 - 1621330678.9
ribokinaseC9I78_RS17400Not AvailablePositive16442 - 1735932233.4
substrate-binding domain-containing proteinC9I78_RS17405Not AvailablePositive17394 - 1840137333.0
hypothetical proteinC9I78_RS17410Not AvailablePositive18631 - 188498404.25
nicotinamide riboside transporter pnucC9I78_RS17415Not AvailablePositive19010 - 1974127169.4
nucleoside phosphorylaseC9I78_RS17420Not AvailablePositive19753 - 2048426364.4

Displaying genes 11 – 20 of 1603 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
VibriosisCausesPMC10472736
Acute gastroenteritisCausesPMC11171697
Wound infectionsCausesPMC11171697
SepticemiaCausesPMC11171697
Food poisoningCausesPMC12108532
Vibrio infectionsCausesPMC12108532
Acute gastroenteritisCausesPMC12849298
Wound infectionsCausesPMC12849298
Ear infectionsCausesPMC12849298
SepticemiaCausesPMC12849298

Displaying health effects 1 – 10 of 23 in total